Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'8-Hairpin pdb486d1C.e13-22
Source: [PDB-id:chain] 486d:C (&rarr PDB)
Source: Information X-RAY CRYSTAL STRUCTURES OF 70S RIBOSOME FUNCTIONAL COMPLEXES
Source: Compound A-SITE TRNA OF 70S RIBOSOME
Source: Resolution 7.50 ANGSTROMS.
Position (13, 22)
Primary structure ('_': anchors) _AGUUGGGA_
Bases with unusual sugar puckers
(Standard: C3'-endo) 		1: C4'-exo, 2: C4'-exo, 4: C3'-exo, 5: C2'-endo, 6: C3'-exo, 7: C2'-endo, 9: C2'-endo, 10: C4'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti) 		4: syn, 6: syn
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 2 3 ↑
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 10 Watson-Crick/Watson-Crick cis
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters