Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'6-Hairpin pdb3php1A.e8-15
Source: [PDB-id:chain] 3php:A (&rarr PDB)
Source: Information STRUCTURE OF THE 3' HAIRPIN OF THE TYMV PSEUDOKNOT: PREFORMATION IN RNA FOLDING
Source: Compound RNA (5'-
Source: Resolution NOT APPLICABLE.
Position (8, 15)
Primary structure ('_': anchors) _GGGUCA_
Bases with unusual sugar puckers
(Standard: C3'-endo)
4: C2'-endo, 5: C4'-exo, 6: C4'-exo, 7: C3'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 8 Watson-Crick/Watson-Crick cis
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters