Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'5-Segment pdb3d2g1A.i39-45
Source: [PDB-id:chain] 3d2g:A (&rarr PDB)
Source: Information STRUCTURAL BASIS OF THIAMINE PYROPHOSPHATE ANALOGUES BINDING TO THE EUKARYOTIC RIBOSWITCH
Source: Compound TPP-SPECIFIC RIBOSWITCH
Source: Resolution 2.25 ANGSTROMS.
Position (39, 45)
Primary structure ('_': anchors) _UUGAA_
Bases with unusual sugar puckers
(Standard: C3'-endo)
2: C1'-exo, 3: C2'-endo, 5: C1'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 2 4
2 6 7
Tertiary structure: Base-pairs
(anchor pairs)
None
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters