Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'1-1-Internal Loop pdb3bo3FB.n48-90
Source: [PDB-id:chain] 3bo3:B (&rarr PDB)
Source: Information A RELAXED ACTIVE SITE FOLLOWING EXON LIGATION BY A GROUP I INTRON
Source: Compound GROUP I INTRON P9
FLIPPED INTERNAL
Source: Resolution 3.40 ANGSTROMS.
Position (49, 89), (51, 87)
Primary structure ('_': anchors) _C_-_G_
Bases with unusual sugar puckers
(Standard: C3'-endo)
2: C2'-exo, 4: C2'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 4 5
2 5 6
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 6 Watson-Crick/Watson-Crick cis
2 3 4 Watson-Crick/Watson-Crick cis y
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters