Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'4-Hairpin pdb3bo01G.e16-21
Source: [PDB-id:chain] 3bo0:G (&rarr PDB)
Source: Information RIBOSOME-SECY COMPLEX
Source: Compound 23S RIBOSOMAL RNA
Source: Resolution 9.60 ANGSTROMS.
Position (16, 21)
Primary structure ('_': anchors) _UACG_
Bases with unusual sugar puckers
(Standard: C3'-endo)
3: C2'-endo, 4: C2'-endo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
4: syn, 5: syn
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 6 Watson-Crick/Watson-Crick cis
2 4 5 Watson-Crick/Sugar cis y
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters