Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'11-Segment pdb2zjr1X.i2296-2308
Source: [PDB-id:chain] 2zjr:X (&rarr PDB)
Source: Information REFINED NATIVE STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT (50S) FROM DEINOCOCCUS RADIODURANS
Source: Compound RIBOSOMAL 23S RNA
Source: Resolution 2.91 ANGSTROMS.
Position (2296, 2308)
Primary structure ('_': anchors) _ACCUCGAUGUC_
Bases with unusual sugar puckers
(Standard: C3'-endo)
2: C4'-exo, 3: C2'-exo, 6: C4'-exo, 8: O4'-endo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
8: syn
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2
2 12 13
Tertiary structure: Base-pairs
(anchor pairs)
None
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters