Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'5-Hairpin pdb2zjq1X.e1249-1255
Source: [PDB-id:chain] 2zjq:X (&rarr PDB)
Source: Information INTERACTION OF L7 WITH L11 INDUCED BY MICROCCOCIN BINDING TO THE DEINOCOCCUS RADIODURANS 50S SUBUNIT
Source: Compound RIBOSOMAL 23S RNA
Source: Resolution 3.30 ANGSTROMS.
Position (1249, 1255)
Primary structure ('_': anchors) _GUCGU_
Bases with unusual sugar puckers
(Standard: C3'-endo)
1: C4'-exo, 2: O4'-endo, 6: O4'-endo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 5 &larr
2 3 4
3 4 5
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 7 Watson-Crick/Watson-Crick cis
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters