Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'5-Hairpin pdb2vho1A.e1130-1136
Source: [PDB-id:chain] 2vho:A (&rarr PDB)
Source: Information STRUCTURE OF PDF BINDING HELIX IN COMPLEX WITH THE RIBOSOME (PART 3 OF 4)
Source: Compound 16S RIBOSOMAL RNA
Source: Resolution 3.74 ANGSTROMS.
Position (1130, 1136)
Primary structure ('_': anchors) _UCCGG_
Bases with unusual sugar puckers
(Standard: C3'-endo)
2: C2'-exo, 3: O4'-endo, 4: O4'-endo, 5: C4'-exo, 6: C2'-endo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
5: syn
Tertiary structure: Stacked bases None
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 7 Watson-Crick/Watson-Crick cis y
2 2 4 Watson-Crick/Watson-Crick cis y
3 4 5 Watson-Crick/Sugar cis y
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters