Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'2-3-Internal Loop pdb2quxFC.n1-25
Source: [PDB-id:chain] 2qux:C (&rarr PDB)
Source: Information PP7 COAT PROTEIN DIMER IN COMPLEX WITH RNA HAIRPIN
Source: Compound RNA (25-MER)
FLIPPED INTERNAL
Source: Resolution 2.44 ANGSTROMS.
Position (3, 23), (7, 20)
Primary structure ('_': anchors) _GU_-_ACA_
Bases with unusual sugar puckers
(Standard: C3'-endo)
5: C2'-exo, 6: C2'-endo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
6: syn
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 8
2 2 3
3 3 5
4 7 8
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 9 Watson-Crick/Watson-Crick cis
2 3 7 Watson-Crick/Watson-Crick cis
3 4 5 Watson-Crick/Watson-Crick cis
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters