Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'7-Hairpin pdb2qus1B.e18-26
Source: [PDB-id:chain] 2qus:B (&rarr PDB)
Source: Information HAMMERHEAD RIBOZYME G12A MUTANT PRE-CLEAVAGE
Source: Compound HAMMERHEAD RIBOZYME
Source: Resolution 2.40 ANGSTROMS.
Position (18, 26)
Primary structure ('_': anchors) _UGUGCUU_
Bases with unusual sugar puckers
(Standard: C3'-endo) 		3: O4'-endo, 4: C2'-endo, 5: O4'-endo, 6: C2'-endo, 7: C2'-endo, 8: C4'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti) 		6: syn
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2 ↑
2 5 7 ↓
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 9 Watson-Crick/Watson-Crick cis
2 5 7 O2'/Bifurcated ?
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters