Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'7-Hairpin pdb2qh31A.e8-16
Source: [PDB-id:chain] 2qh3:A (&rarr PDB)
Source: Information SOLUTION STRUCTURE OF THE U64 H/ACA SNORNA 3' TERMINAL HAIRPIN LOOP
Source: Compound HUMAN U64 H/ACA SNORNA
Source: Resolution NOT APPLICABLE.
Position (8, 16)
Primary structure ('_': anchors) _UUACUGU_
Bases with unusual sugar puckers
(Standard: C3'-endo)
3: C3'-exo, 5: C2'-exo, 6: C3'-exo, 7: C2'-exo, 8: C4'-exo, 9: C2'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
7: syn
Tertiary structure: Stacked bases None
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 9 Watson-Crick/Watson-Crick cis
2 3 4 C/O2' ?
3 4 7 Hoogsteen/Watson-Crick cis y
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters