Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'5-Hairpin pdb2ozb1C.e16-22
Source: [PDB-id:chain] 2ozb:C (&rarr PDB)
Source: Information STRUCTURE OF A HUMAN PRP31-15.5K-U4 SNRNA COMPLEX
Source: Compound RNA COMPRISING THE 5' STEM-LOOP RNA OF U4SNRNA
Source: Resolution 2.60 ANGSTROMS.
Position (16, 22)
Primary structure ('_': anchors) _UUUAU_
Bases with unusual sugar puckers
(Standard: C3'-endo)
2: C4'-exo, 3: C2'-endo, 4: C1'-exo, 5: C2'-endo, 6: C1'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 5
2 2 3
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 7 Watson-Crick/Watson-Crick cis
2 2 5 Bifurcated/O2' ?
3 3 5 Bifurcated/O2' ?
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters