Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'2-2-Internal Loop pdb2om71C.n14-81
Source: [PDB-id:chain] 2om7:C (&rarr PDB)
Source: Information STRUCTURAL BASIS FOR INTERACTION OF THE RIBOSOME WITH THE SWITCH REGIONS OF GTP-BOUND ELONGATION FACTORS
Source: Compound FRAGMENT OF 16S RRNA (H44)
Source: Resolution 7.30 ANGSTROMS.
Position (16, 79), (19, 76)
Primary structure ('_': anchors) _GA_-_GA_
Bases with unusual sugar puckers
(Standard: C3'-endo) 		None
Bases with unusual glycosidic-bond configuration
(Standard: anti) 		None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2 ↑
2 2 6 &larr
3 3 7 →
4 4 6 →
5 7 8 ↑
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 8 Watson-Crick/Watson-Crick cis
2 2 7 Bifurcated/O2' trans
3 3 6 O2'/Bifurcated trans y
4 4 5 Watson-Crick/Watson-Crick cis
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters