Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'2-1-Internal Loop pdb2o44FA.n2724-2770
Source: [PDB-id:chain] 2o44:A (&rarr PDB)
Source: Information STRUCTURE OF 23S RRNA OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS IN COMPLEX WITH THE MACROLIDE JOSAMYCIN
Source: Compound 23S RRNA
FLIPPED INTERNAL
Source: Resolution 3.30 ANGSTROMS.
Position (2725, 2769), (2727, 2766)
Primary structure ('_': anchors) _GC_-_G_
Bases with unusual sugar puckers
(Standard: C3'-endo)
3: C4'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
3: syn
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 5 6
2 6 7
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 7 Watson-Crick/Watson-Crick cis y
2 4 5 Watson-Crick/Watson-Crick cis y
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters