Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'9-Hairpin pdb2nr01H.e57-67
Source: [PDB-id:chain] 2nr0:H (&rarr PDB)
Source: Information CRYSTAL STRUCTURE OF PSEUDOUDIRINDE SYNTHASE TRUA IN COMPLEX WITH LEUCYL TRNA
Source: Compound LEUCYL TRNA
Source: Resolution 3.90 ANGSTROMS.
Position (57, 67)
Primary structure ('_': anchors) _GUUCAAGUC_
Bases with unusual sugar puckers
(Standard: C3'-endo) 		7: C4'-exo, 8: C2'-exo, 9: O4'-endo
Bases with unusual glycosidic-bond configuration
(Standard: anti) 		None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2 ↑
2 2 3 ↑
3 5 6 ↑
4 7 10 ↑
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 11 Watson-Crick/Watson-Crick cis
2 4 6 O2'/Hoogsteen ?
3 4 7 O2'/Watson-Crick ?
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters