Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'7-Segment pdb2jl81A.i2732-2740
Source: [PDB-id:chain] 2jl8:A (&rarr PDB)
Source: Information INSIGHTS INTO TRANSLATIONAL TERMINATION FROM THE STRUCTURE OF RF2 BOUND TO THE RIBOSOME (PART 4 OF 4). THIS FILE CONTAINS THE 50S SUBUNIT.
Source: Compound 23S RIBOSOMAL RNA
Source: Resolution 3.45 ANGSTROMS.
Position (2732, 2740)
Primary structure ('_': anchors) _AAGAUGA_
Bases with unusual sugar puckers
(Standard: C3'-endo)
3: C2'-endo, 5: C2'-endo, 6: C2'-endo, 7: C2'-endo, 8: C2'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
3: syn
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2
2 3 5
3 3 9
4 6 8
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 4 6 Hoogsteen/Sugar cis y
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters