Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'9-Hairpin pdb2jl71W.e30-40
Source: [PDB-id:chain] 2jl7:W (&rarr PDB)
Source: Information INSIGHTS INTO TRANSLATIONAL TERMINATION FROM THE STRUCTURE OF RF2 BOUND TO THE RIBOSOME (PART 3 OF 4). THIS FILE CONTAINS THE 30S SUBUNIT.
Source: Compound E-SITE TRNA PHE OR P-SITE TRNA PHE (UNMODIFIED
Source: Resolution 3.45 ANGSTROMS.
Position (30, 40)
Primary structure ('_': anchors) _AUUGAAAAU_
Bases with unusual sugar puckers
(Standard: C3'-endo)
None
Bases with unusual glycosidic-bond configuration
(Standard: anti)
10: syn
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2
2 2 3
3 5 6
4 6 7
5 7 8
6 8 9
7 9 10 &larr
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 11 Watson-Crick/Watson-Crick cis
2 2 10 Watson-Crick/Watson-Crick cis y
3 4 6 O2'/Hoogsteen ?
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters