Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'11-Hairpin pdb2jl51A.e71-83
Source: [PDB-id:chain] 2jl5:A (&rarr PDB)
Source: Information INSIGHTS INTO TRANSLATIONAL TERMINATION FROM THE STRUCTURE OF RF2 BOUND TO THE RIBOSOME (PART 1 OF 4). THIS FILE CONTAINS THE 30S SUBUNIT.
Source: Compound 16S RRNA
Source: Resolution 3.45 ANGSTROMS.
Position (71, 83)
Primary structure ('_': anchors) _GGGUUUUACUC_
Bases with unusual sugar puckers
(Standard: C3'-endo) 		1: C2'-exo, 3: C4'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti) 		3: syn, 6: syn, 7: syn
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 2 3 ↑
2 4 5 ↑
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 13 Watson-Crick/Watson-Crick cis y
2 2 3 Bifurcated/O2' ?
3 2 12 O2'/Bifurcated ?
4 12 13 Watson-Crick/O2' ?
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters