Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'1-4-Internal Loop pdb2j28F8.n14-58
Source: [PDB-id:chain] 2j28:8 (&rarr PDB)
Source: Information MODEL OF E. COLI SRP BOUND TO 70S RNCS
Source: Compound 4.5S SIGNAL RECOGNITION PARTICLE RNA
FLIPPED INTERNAL
Source: Resolution 8.00 ANGSTROMS.
Position (21, 51), (26, 49)
Primary structure ('_': anchors) _A_-_ACCA_
Bases with unusual sugar puckers
(Standard: C3'-endo)
5: C3'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2
2 2 3
3 2 4
4 6 7
5 7 8
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 9 Watson-Crick/Watson-Crick cis
2 3 4 Watson-Crick/Watson-Crick cis
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters