Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'4-Hairpin pdb2izm1R.e5-10
Source: [PDB-id:chain] 2izm:R (&rarr PDB)
Source: Information MS2-RNA HAIRPIN (C-10) COMPLEX
Source: Compound 5'-R(*AP*CP*AP*UP*GP*CP*GP*GP*AP*UP
Source: Resolution 2.7 ANGSTROMS.
Position (5, 10)
Primary structure ('_': anchors) _AUCA_
Bases with unusual sugar puckers
(Standard: C3'-endo) 		3: C2'-endo, 4: C2'-endo, 5: C2'-endo
Bases with unusual glycosidic-bond configuration
(Standard: anti) 		None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2 ↑
2 2 4 ↑
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 6 Watson-Crick/Watson-Crick cis
2 3 4 Bifurcated/O2' ?
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters