Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'3-Segment pdb2ipy1D.i5-9
Source: [PDB-id:chain] 2ipy:D (&rarr PDB)
Source: Information CRYSTAL STRUCTURE OF IRON REGULATORY PROTEIN 1 IN COMPLEX WITH FERRITIN H IRE-RNA
Source: Compound FERRITIN IRE RNA
Source: Resolution 2.80 ANGSTROMS.
Position (5, 9)
Primary structure ('_': anchors) _UGC_
Bases with unusual sugar puckers
(Standard: C3'-endo)
3: O4'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 3 5
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 2 Hoogsteen/O2' ?
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters