Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'7-Hairpin pdb2i821E.e7-15
Source: [PDB-id:chain] 2i82:E (&rarr PDB)
Source: Information CRYSTAL STRUCTURE OF PSEUDOURIDINE SYNTHASE RLUA: INDIRECT SEQUENCE READOUT THROUGH PROTEIN-INDUCED RNA STRUCTURE
Source: Compound 5'-
Source: Resolution 2.05 ANGSTROMS.
Position (7, 15)
Primary structure ('_': anchors) _NUGAAAA_
Bases with unusual sugar puckers
(Standard: C3'-endo) 		1: C2'-endo, 2: unknown, 4: C2'-endo, 5: C2'-endo, 6: C2'-endo, 7: C3'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti) 		2: unknown, 6: syn
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 3 5 ↑
2 6 8 ↑
3 8 9 ↑
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 9 Watson-Crick/Watson-Crick cis y
2 3 6 Hoogsteen/Watson-Crick trans
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters