Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'4-Hairpin pdb2hua1A.e17-22
Source: [PDB-id:chain] 2hua:A (&rarr PDB)
Source: Information SOLUTION STRUCTURE OF CSFV IRES DOMAIN IIA
Source: Compound CSFV IRES DOMAIN IIA
Source: Resolution NOT APPLICABLE.
Position (17, 22)
Primary structure ('_': anchors) _UUCG_
Bases with unusual sugar puckers
(Standard: C3'-endo) 		2: C4'-exo, 3: C2'-endo, 4: C2'-endo, 6: C2'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti) 		5: syn
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2 ↑
2 2 4 ↑
3 5 6 →
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 6 Watson-Crick/Watson-Crick cis
2 2 5 Watson-Crick/O2' trans
3 3 4 Bifurcated/O2' ?
4 3 5 C/O2' ?
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters