Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'3-3-Internal Loop pdb2hgr1A.n757-783
Source: [PDB-id:chain] 2hgr:A (&rarr PDB)
Source: Information 70S T.TH. RIBOSOME FUNCTIONAL COMPLEX WITH MRNA AND E- AND P-SITE TRNAS AT 4.5A. THIS ENTRY 2HGR CONTAINS 30S RIBOSOMAL SUBUNIT. THE 50S RIBOSOMAL SUBUNIT CAN BE FOUND IN PDB ENTRY 2HGU.
Source: Compound 16S RRNA
Source: Resolution 4.51 ANGSTROMS.
Position (758, 782), (762, 778)
Primary structure ('_': anchors) _AAA_-_GUA_
Bases with unusual sugar puckers
(Standard: C3'-endo) 		3: C2'-exo, 7: C2'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti) 		None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 3 9 →
2 4 8 →
3 9 10 ↑
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 10 Watson-Crick/Watson-Crick cis
2 2 9 Hoogsteen/Sugar trans y
3 3 7 Bifurcated/O2' ?
4 3 8 Watson-Crick/Hoogsteen trans
5 5 6 Watson-Crick/Watson-Crick cis
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters