Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'3-Hairpin pdb2hgi1A.e75-79
Source: [PDB-id:chain] 2hgi:A (&rarr PDB)
Source: Information CRYSTAL STRUCTURE OF THE 70S THERMUS THERMOPHILUS RIBOSOME SHOWING HOW THE 16S 3'-END MIMICKS MRNA E AND P CODONS. THIS ENTRY 2HGI CONTAINS 30S RIBOSOMAL SUBUNIT. THE 50S RIBOSOMAL SUBUNIT CAN BE FOUND IN PDB ENTRY 2HGJ.
Source: Compound 16S RRNA
Source: Resolution 5.00 ANGSTROMS.
Position (75, 79)
Primary structure ('_': anchors) _UUU_
Bases with unusual sugar puckers
(Standard: C3'-endo)
4: C4'-exo, 5: C4'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
5: syn
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 2 3
2 3 4
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 3 O2'/Watson-Crick ?
2 1 4 Hoogsteen/Sugar trans y
3 1 5 Watson-Crick/Watson-Crick cis
4 4 5 Watson-Crick/O2' ?
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters