Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'2-2-Internal Loop pdb2hem1A.n6-19
Source: [PDB-id:chain] 2hem:A (&rarr PDB)
Source: Information NMR STRUCTURE AND MG2+ BINDING OF AN RNA SEGMENT THAT UNDERLIES THE L7/L12 STALK IN THE E.COLI 50S RIBOSOMAL SUBUNIT.
Source: Compound 5'-
Source: Resolution NOT APPLICABLE.
Position (3, 22), (6, 19)
Primary structure ('_': anchors) _AA_-_GG_
Bases with unusual sugar puckers
(Standard: C3'-endo)
1: C2'-endo, 2: C2'-endo, 3: C2'-endo, 5: C2'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 2 3
2 3 4
3 5 6
4 6 7
5 7 8
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 2 C/O2' ?
2 1 8 Watson-Crick/Watson-Crick cis
3 2 3 C/O2' ?
4 2 7 Watson-Crick/Watson-Crick cis
5 3 6 Watson-Crick/Watson-Crick cis
6 4 5 Watson-Crick/Watson-Crick cis
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters