Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'4-Hairpin pdb2hem1A.e10-15
Source: [PDB-id:chain] 2hem:A (&rarr PDB)
Source: Information NMR STRUCTURE AND MG2+ BINDING OF AN RNA SEGMENT THAT UNDERLIES THE L7/L12 STALK IN THE E.COLI 50S RIBOSOMAL SUBUNIT.
Source: Compound 5'-
Source: Resolution NOT APPLICABLE.
Position (10, 15)
Primary structure ('_': anchors) _UUCG_
Bases with unusual sugar puckers
(Standard: C3'-endo)
3: C2'-endo, 4: C1'-exo, 6: C2'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
5: syn
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2
2 5 6
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 6 Watson-Crick/Watson-Crick cis
2 2 4 Watson-Crick/Watson-Crick cis y
3 2 5 Watson-Crick/Watson-Crick trans y
4 3 4 Bifurcated/O2' ?
5 3 5 Hoogsteen/O2' ?
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters