Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'1-1-Internal Loop pdb2gv41A.n7-16
Source: [PDB-id:chain] 2gv4:A (&rarr PDB)
Source: Information SOLUTION STRUCTURE OF THE POLIOVIRUS 3'-UTR Y-STEM
Source: Compound SHORT RNA STRAND 5'-GGACCUCUCGAAAGAGUGGUCC-3'
Source: Resolution NOT APPLICABLE.
Position (5, 18), (7, 16)
Primary structure ('_': anchors) _U_-_U_
Bases with unusual sugar puckers
(Standard: C3'-endo)
6: C2'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 2 3
2 4 5
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 6 Watson-Crick/Watson-Crick cis
2 3 4 Watson-Crick/Watson-Crick cis
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters