Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'8-Segment pdb2gis1A.i60-69
Source: [PDB-id:chain] 2gis:A (&rarr PDB)
Source: Information STRUCTURE OF THE S-ADENOSYLMETHIONINE RIBOSWITCH MRNA REGULATORY ELEMENT
Source: Compound SAM-I RIBOSWITCH
Source: Resolution 2.90 ANGSTROMS.
Position (60, 69)
Primary structure ('_': anchors) _AAUUCCUG_
Bases with unusual sugar puckers
(Standard: C3'-endo)
4: C3'-exo, 5: C4'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 2 3
2 3 6
3 7 8
4 8 9
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 9 10 Bifurcated/O2' ?
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters