Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'2-1-Internal Loop pdb2fey1A.n12-35
Source: [PDB-id:chain] 2fey:A (&rarr PDB)
Source: Information THE STRUCTURE OF STEM LOOP IV OF TETRAHYMENA TELOMERASE RNA
Source: Compound STEM-LOOP IV OF TETRAHYMENA TELOMERASE RNA
Source: Resolution NOT APPLICABLE.
Position (14, 33), (17, 31)
Primary structure ('_': anchors) _UU_-_A_
Bases with unusual sugar puckers
(Standard: C3'-endo)
1: O4'-endo, 2: C2'-endo, 6: C4'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 4 6
2 5 6
3 6 7
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 7 Watson-Crick/Watson-Crick cis
2 3 4 C/O2' ?
3 4 5 Watson-Crick/Watson-Crick cis
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters