Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'7-Hairpin pdb2ct81C.e54-62
Source: [PDB-id:chain] 2ct8:C (&rarr PDB)
Source: Information CRYSTAL STRUCTURE OF AQUIFEX AEOLICUS METHIONYL-TRNA SYNTHETASE COMPLEXED WITH TRNA(MET) AND METHIONYL- ADENYLATE ANOLOGUE
Source: Compound RNA (74-MER)
Source: Resolution 2.70 ANGSTROMS.
Position (54, 62)
Primary structure ('_': anchors) _UUCGAGU_
Bases with unusual sugar puckers
(Standard: C3'-endo)
2: C2'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
7: syn
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2
2 2 3
3 6 9
4 7 8
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 9 Watson-Crick/Watson-Crick cis
2 2 6 Hoogsteen/Watson-Crick trans
3 3 5 O2'/Watson-Crick ?
4 3 6 O2'/Watson-Crick ?
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters