Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'11-Hairpin pdb2bte1B.e12-24
Source: [PDB-id:chain] 2bte:B (&rarr PDB)
Source: Information THERMUS THERMOPHILUS LEUCYL-TRNA SYNTHETASE COMPLEXED WITH WITH A TRNALEU TRANSCRIPT IN THE POST-EDITING CONFORMATION AND A POST-TRANSFER EDITING SUBSTRATE ANALOGUE
Source: Compound TRNALEU TRANSCRIPT WITH ANTICODON CAG
Source: Resolution 2.90 ANGSTROMS.
Position (12, 24)
Primary structure ('_': anchors) _GAAUGGGUAGA_
Bases with unusual sugar puckers
(Standard: C3'-endo) 		7: C3'-exo, 8: C2'-endo, 9: C3'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti) 		8: syn
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2 ↑
2 3 4 ↑
3 10 11 ↑
4 12 13 ↑
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 13 Watson-Crick/Watson-Crick cis
2 2 11 O2'/Bifurcated cis y
3 2 12 Bifurcated/O2' trans y
4 3 10 O2'/Watson-Crick trans y
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters