Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'10-Segment pdb2b661A.i2759-2770
Source: [PDB-id:chain] 2b66:A (&rarr PDB)
Source: Information 50S RIBOSOMAL SUBUNIT FROM A CRYSTAL STRUCTURE OF RELEASE FACTOR RF1, TRNAS AND MRNA BOUND TO THE RIBOSOME. THIS FILE CONTAINS THE 50S SUBUNIT FROM A CRYSTAL STRUCTURE OF RELEASE FACTOR RF1, TRNAS AND MRNA BOUND TO THE RIBOSOME AND IS DESCRIBED IN REMARK 400
Source: Compound 23S RIBOSOMAL RNA
Source: Resolution 5.90 ANGSTROMS.
Position (2759, 2770)
Primary structure ('_': anchors) _GGGUGUAAGC_
Bases with unusual sugar puckers
(Standard: C3'-endo)
5: C2'-exo, 6: C2'-endo, 7: C2'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
7: syn
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2
2 2 3
3 3 4
4 9 10
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 6 7 Watson-Crick/Sugar cis y
2 10 11 Watson-Crick/Sugar cis y
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters