Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'7-Segment pdb2au41A.i28-36
Source: [PDB-id:chain] 2au4:A (&rarr PDB)
Source: Information CLASS I GTP APTAMER
Source: Compound CLASS I RNA APTAMER TO GTP
Source: Resolution NOT APPLICABLE.
Position (28, 36)
Primary structure ('_': anchors) _GUGAAAA_
Bases with unusual sugar puckers
(Standard: C3'-endo) 		1: O4'-endo, 2: C1'-endo, 3: C4'-exo, 5: C3'-exo, 6: C2'-exo, 7: O4'-endo, 9: C4'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti) 		2: syn, 8: syn
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 2 4 →
2 4 5 ↑
3 6 7 ↑
4 8 9 →
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 2 Sugar/O2' ?
2 5 6 Hoogsteen/O2' ?
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters