Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'7-Hairpin pdb2ake1B.e30-38
Source: [PDB-id:chain] 2ake:B (&rarr PDB)
Source: Information STRUCTURE OF HUMAN TRYPTOPHANYL-TRNA SYNTHETASE IN COMPLEX WITH TRNA(TRP)
Source: Compound TRANSFER RNA-TRP
Source: Resolution 3.10 ANGSTROMS.
Position (30, 38)
Primary structure ('_': anchors) _CUCCAGA_
Bases with unusual sugar puckers
(Standard: C3'-endo)
3: C2'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
8: syn
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2
2 5 6
3 6 7
4 7 8 &larr
5 8 9
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 9 Watson-Crick/Watson-Crick cis
2 2 8 Bifurcated/Watson-Crick cis y
3 3 5 O2'/Watson-Crick ?
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters