Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'3-Segment pdb1z431A.i37-41
Source: [PDB-id:chain] 1z43:A (&rarr PDB)
Source: Information CRYSTAL STRUCTURE OF 7S.S SRP RNA OF M. JANNASCHII
Source: Compound RNA (101-MER)
Source: Resolution 2.60 ANGSTROMS.
Position (37, 41)
Primary structure ('_': anchors) _UAA_
Bases with unusual sugar puckers
(Standard: C3'-endo) 		1: C2'-exo, 2: C4'-endo, 3: C2'-endo, 4: C3'-exo, 5: C2'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti) 		4: syn
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 3 4 ↑
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 3 4 Hoogsteen/O2' ?
2 4 5 Bifurcated/O2' ?
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters