Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'6-Segment pdb1xnr1A.i268-275
Source: [PDB-id:chain] 1xnr:A (&rarr PDB)
Source: Information CRYSTAL STRUCTURE OF AN INOSINE-CYTOSINE WOBBLE BASE PAIR IN THE CONTEXT OF THE DECODING CENTER
Source: Compound 16S RIBOSOMAL RNA
Source: Resolution 3.10 ANGSTROMS.
Position (268, 275)
Primary structure ('_': anchors) _GACGAC_
Bases with unusual sugar puckers
(Standard: C3'-endo)
4: C2'-endo, 5: C2'-endo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2
2 6 7
3 7 8
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 6 7 Bifurcated/O2' ?
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters