Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'1-1-Internal Loop pdb1xmq1A.n181-188
Source: [PDB-id:chain] 1xmq:A (&rarr PDB)
Source: Information CRYSTAL STRUCTURE OF T6A37-ASLLYSUUU AAA-MRNA BOUND TO THE DECODING CENTER
Source: Compound 16S RIBOSOMAL RNA
Source: Resolution 3.00 ANGSTROMS.
Position (179, 190), (181, 188)
Primary structure ('_': anchors) _C_-_G_
Bases with unusual sugar puckers
(Standard: C3'-endo)
1: C2'-endo, 3: C2'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
2: syn
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 4 5
2 5 6
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 6 Watson-Crick/Watson-Crick cis
2 3 4 Watson-Crick/Watson-Crick cis
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters