Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'5-Hairpin pdb1xmo1A.e202-208
Source: [PDB-id:chain] 1xmo:A (&rarr PDB)
Source: Information CRYSTAL STRUCTURE OF MNM5U34T6A37-TRNALYSUUU COMPLEXED WITH AAG-MRNA IN THE DECODING CENTER
Source: Compound 16S RIBOSOMAL RNA
Source: Resolution 3.25 ANGSTROMS.
Position (202, 208)
Primary structure ('_': anchors) _CUUUG_
Bases with unusual sugar puckers
(Standard: C3'-endo)
2: C2'-endo, 3: C2'-endo, 7: C2'-endo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 6 &larr
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 7 Watson-Crick/Watson-Crick cis y
2 2 4 O2'/Watson-Crick ?
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters