Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'17-Segment pdb1w2b10.i2180-2198
Source: [PDB-id:chain] 1w2b:0 (&rarr PDB)
Source: Information TRIGGER FACTOR RIBOSOME BINDING DOMAIN IN COMPLEX WITH 50S
Source: Compound 23S RRNA
Source: Resolution 3.50 ANGSTROMS.
Position (2180, 2198)
Primary structure ('_': anchors) _GCCCUAUGGCUAUCUCA_
Bases with unusual sugar puckers
(Standard: C3'-endo) 		2: C4'-exo, 6: C4'-exo, 7: O4'-endo, 8: C4'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti) 		7: syn
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2 ↑
2 3 4 ↑
3 4 5 ↑
4 7 9 →
5 9 10 ↑
6 10 11 ↑
7 12 13 ↑
8 13 14 ↑
9 14 15 ↑
10 15 16 ↑
11 17 18 ↑
12 18 19 ↑
Tertiary structure: Base-pairs
(anchor pairs) 		None
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters