Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'3-3-Internal Loop pdb1vsp1w.n634-644 | |||||||||||||||||||||||||
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Source: [PDB-id:chain] | 1vsp:w (&rarr PDB) | ||||||||||||||||||||||||
Source: Information | INTERACTIONS AND DYNAMICS OF THE SHINE-DALGARNO HELIX IN THE 70S RIBOSOME. THIS FILE, 1VSP, CONTAINS THE 50S RIBOSOME SUBUNIT. 30S RIBOSOME SUBUNIT IS IN THE FILE 2QNH | ||||||||||||||||||||||||
Source: Compound | 23S LARGE SUBUNIT RIBOSOMAL RNA | ||||||||||||||||||||||||
Source: Resolution | 3.83 ANGSTROMS. | ||||||||||||||||||||||||
Position | (630, 648), (634, 644) | ||||||||||||||||||||||||
Primary structure ('_': anchors) | _UAA_-_GGA_ | ||||||||||||||||||||||||
Bases with unusual sugar puckers (Standard: C3'-endo) |
1: C2'-exo, 3: C2'-exo, 5: C2'-exo, 6: C2'-exo, 7: C2'-exo, 8: C4'-exo | ||||||||||||||||||||||||
Bases with unusual glycosidic-bond configuration (Standard: anti) |
8: syn | ||||||||||||||||||||||||
Tertiary structure: Stacked bases |
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Tertiary structure: Base-pairs (anchor pairs) |
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Downloads |
Atom coordinates (PDB format) Contact annotation (MC-Annotate format) |
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3D Structure | Structure Graph | ||||||||||||||||||||||||
Structural Clusters |