Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'7-Segment pdb1vsp1w.i1564-1572 | |||||||||||||||||||||
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Source: [PDB-id:chain] | 1vsp:w (&rarr PDB) | ||||||||||||||||||||
Source: Information | INTERACTIONS AND DYNAMICS OF THE SHINE-DALGARNO HELIX IN THE 70S RIBOSOME. THIS FILE, 1VSP, CONTAINS THE 50S RIBOSOME SUBUNIT. 30S RIBOSOME SUBUNIT IS IN THE FILE 2QNH | ||||||||||||||||||||
Source: Compound | 23S LARGE SUBUNIT RIBOSOMAL RNA | ||||||||||||||||||||
Source: Resolution | 3.83 ANGSTROMS. | ||||||||||||||||||||
Position | (1564, 1572) | ||||||||||||||||||||
Primary structure ('_': anchors) | _UGACAAC_ | ||||||||||||||||||||
Bases with unusual sugar puckers (Standard: C3'-endo) |
3: C2'-exo, 6: C4'-exo, 7: C2'-exo, 8: C2'-exo, 9: C2'-exo | ||||||||||||||||||||
Bases with unusual glycosidic-bond configuration (Standard: anti) |
None | ||||||||||||||||||||
Tertiary structure: Stacked bases |
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Tertiary structure: Base-pairs (anchor pairs) |
None | ||||||||||||||||||||
Downloads |
Atom coordinates (PDB format) Contact annotation (MC-Annotate format) |
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3D Structure | Structure Graph | ||||||||||||||||||||
Structural Clusters |