Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
| '4-Hairpin pdb1vsp1w.e121-126 | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Source: [PDB-id:chain] | 1vsp:w (&rarr PDB) | ||||||||||||||||||
| Source: Information | INTERACTIONS AND DYNAMICS OF THE SHINE-DALGARNO HELIX IN THE 70S RIBOSOME. THIS FILE, 1VSP, CONTAINS THE 50S RIBOSOME SUBUNIT. 30S RIBOSOME SUBUNIT IS IN THE FILE 2QNH | ||||||||||||||||||
| Source: Compound | 23S LARGE SUBUNIT RIBOSOMAL RNA | ||||||||||||||||||
| Source: Resolution | 3.83 ANGSTROMS. | ||||||||||||||||||
| Position | (121, 126) | ||||||||||||||||||
| Primary structure ('_': anchors) | _GGAA_ | ||||||||||||||||||
|
Bases with unusual sugar puckers (Standard: C3'-endo) |
None | ||||||||||||||||||
|
Bases with unusual glycosidic-bond configuration (Standard: anti) |
3: syn | ||||||||||||||||||
| Tertiary structure: Stacked bases | None | ||||||||||||||||||
|
Tertiary structure: Base-pairs (anchor pairs) |
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| Downloads |
Atom coordinates (PDB format) Contact annotation (MC-Annotate format) |
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| 3D Structure | Structure Graph | ||||||||||||||||||
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| Structural Clusters | |||||||||||||||||||