Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'5-Hairpin pdb1uuu1A.e7-13
Source: [PDB-id:chain] 1uuu:A (&rarr PDB)
Source: Information STRUCTURE OF AN RNA HAIRPIN LOOP WITH A 5'-CGUUUCG-3' LOOP MOTIF BY HETERONUCLEAR NMR SPECTROSCOPY AND DISTANCE GEOMETRY, 15 STRUCTURES
Source: Compound RNA (5'-
Source: Resolution NOT APPLICABLE.
Position (7, 13)
Primary structure ('_': anchors) _GUUUC_
Bases with unusual sugar puckers
(Standard: C3'-endo) 		3: C2'-exo, 4: C3'-exo, 5: C2'-endo, 6: C2'-endo, 7: O4'-endo
Bases with unusual glycosidic-bond configuration
(Standard: anti) 		None
Tertiary structure: Stacked bases None
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 5 O2'/Watson-Crick ?
2 1 7 Watson-Crick/Watson-Crick cis
3 2 4 O2'/Hoogsteen ?
4 2 7 Sugar/Hoogsteen trans y
5 5 7 Watson-Crick/O2' ?
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters