Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'2-3-Internal Loop pdb1tlrFA.n1-23
Source: [PDB-id:chain] 1tlr:A (&rarr PDB)
Source: Information SOLUTION STRUCTURE OF TETRALOOP RECEPTOR RNA, NMR, 20 STRUCTURES
Source: Compound RNA TETRALOOP RECEPTOR (5'-
FLIPPED INTERNAL
Source: Resolution NOT APPLICABLE.
Position (4, 20), (8, 17)
Primary structure ('_': anchors) _AU_-_UAA_
Bases with unusual sugar puckers
(Standard: C3'-endo)
3: C4'-exo, 6: C2'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 3 6
2 3 7 &larr
3 5 6
4 7 8
5 8 9
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 9 Watson-Crick/Watson-Crick cis
2 2 8 Hoogsteen/Watson-Crick trans y
3 4 5 Watson-Crick/Watson-Crick cis
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters