Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'9-Hairpin pdb1sz11F.e30-40
Source: [PDB-id:chain] 1sz1:F (&rarr PDB)
Source: Information MECHANISM OF CCA-ADDING ENZYMES SPECIFICITY REVEALED BY CRYSTAL STRUCTURES OF TERNARY COMPLEXES
Source: Compound T-RNA (76-MER)
Source: Resolution 6.21 ANGSTROMS.
Position (30, 40)
Primary structure ('_': anchors) _ACUGAAGAU_
Bases with unusual sugar puckers
(Standard: C3'-endo)
6: C2'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2
2 2 3
3 3 4
4 5 6
5 6 7
6 7 8
7 8 9
8 9 10 &larr
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 11 Watson-Crick/Watson-Crick cis
2 4 6 Hoogsteen/O2' ?
3 4 7 O2'/Watson-Crick ?
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters