Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'6-Hairpin pdb1s031A.e22-29
Source: [PDB-id:chain] 1s03:A (&rarr PDB)
Source: Information THE STRUCTURE OF A RIBOSOMAL PROTEIN S8/SPC OPERON MRNA COMPLEX
Source: Compound 47-MER
Source: Resolution 2.70 ANGSTROMS.
Position (22, 29)
Primary structure ('_': anchors) _GGCAAU_
Bases with unusual sugar puckers
(Standard: C3'-endo)
3: C4'-exo, 4: C1'-exo, 6: C3'-exo, 7: O4'-endo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 1 4 Bifurcated/O2' ?
2 1 8 Watson-Crick/Watson-Crick cis
3 3 6 Bifurcated/O2' ?
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters