Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'5-Segment pdb1ry11A.i70-76
Source: [PDB-id:chain] 1ry1:A (&rarr PDB)
Source: Information STRUCTURE OF THE SIGNAL RECOGNITION PARTICLE INTERACTING WITH THE ELONGATION-ARRESTED RIBOSOME
Source: Compound ALU DOMAIN (SRP9, SRP14 + RNA)
Source: Resolution 2.00 ANGSTROMS.
Position (70, 76)
Primary structure ('_': anchors) _GAACC_
Bases with unusual sugar puckers
(Standard: C3'-endo)
None
Bases with unusual glycosidic-bond configuration
(Standard: anti)
None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2
2 3 6 &larr
3 4 5
4 5 6
Tertiary structure: Base-pairs
(anchor pairs)
# Position 1 Position 2 Edges Configuration Single?
1 3 7 O2'/Bifurcated ?
2 5 6 Bifurcated/O2' ?
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters