Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'8-Segment pdb1rlg1C.i15-24
Source: [PDB-id:chain] 1rlg:C (&rarr PDB)
Source: Information MOLECULAR BASIS OF BOX C/D RNA-PROTEIN INTERACTION: CO- CRYSTAL STRUCTURE OF THE ARCHAEAL SRNP INTIATION COMPLEX
Source: Compound 25-MER
Source: Resolution 2.70 ANGSTROMS.
Position (15, 24)
Primary structure ('_': anchors) _CGUGAUGA_
Bases with unusual sugar puckers
(Standard: C3'-endo)
2: C3'-exo, 3: C3'-exo, 4: C3'-exo, 5: C2'-endo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
3: syn, 9: syn
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2
2 6 7
3 7 8
4 8 9 &larr
5 9 10
Tertiary structure: Base-pairs
(anchor pairs)
None
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters