Please cite:
Schudoma et al.,
Nucl. Acids Res. 38: 970-980.
DOI 10.1093/nar/gkp1010.
'3-Segment pdb1rfr1A.i5-9
Source: [PDB-id:chain] 1rfr:A (&rarr PDB)
Source: Information NMR STRUCTURE OF THE 30MER STEMLOOP-D OF COXSACKIEVIRAL RNA
Source: Compound STEMLOOP-D RNA OF THE 5'-CLOVERLEAF OF
Source: Resolution NOT APPLICABLE.
Position (5, 9)
Primary structure ('_': anchors) _UCU_
Bases with unusual sugar puckers
(Standard: C3'-endo)
3: C4'-exo
Bases with unusual glycosidic-bond configuration
(Standard: anti)
None
Tertiary structure: Stacked bases
# Position 1 Position 2 Stacking direction
1 1 2
2 2 3
3 4 5
Tertiary structure: Base-pairs
(anchor pairs)
None
Downloads Atom coordinates (PDB format)
Contact annotation (MC-Annotate format)
3D Structure Structure Graph
Structural Clusters